Microbial Omics

FeGenie identifies genes related to iron metabolism using a hidden Markov model (HMM) database. It is frequently used in environmental microbiology and microbial ecology to explore genetic markers associated with iron acquisition, storage, and redox processes.

Name: Email Address To Send Results: Data Input (drag and drop one or more genome assemblies in FASTA format)

Drag and drop files here or click to select files.

Please be sure to cite FeGenie if you use it for your publication:
Garber, A. I., Nealson, K. H., Okamoto, A., McAllister, S. M., Chan, C. S., Barco, R. A., & Merino, N. (2020). FeGenie: A Comprehensive Tool for the Identification of Iron Genes and Iron Gene Neighborhoods in Genome and Metagenome Assemblies. Frontiers in Microbiology, 11, 37. https://doi.org/10.3389/fmicb.2020.00037